PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_36351.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 246aa    MW: 27001.6 Da    PI: 7.598
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_36351.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1370122155
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   r+ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ ++ +YI +Lq
  MLOC_36351.1  70 RKISHNAYERDRRKQLNELYSDLRSLLPDsD---HTKKLSIPITVSRVLKYIPELQ 122
                   6889*************************44...6666***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-1667137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.60E-1169125No hitNo description
PROSITE profilePS5088813.72569121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1070122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-1270137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-975127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MGHQTQMFDD PFASSMSSLD ADIFSVAGGL HPSQWPGLDH DVSLAPAANN GTSSGGYGSP  60
GGGDGSGSHR KISHNAYERD RRKQLNELYS DLRSLLPDSD HTKKLSIPIT VSRVLKYIPE  120
LQKQVDGLEK KKEELTRASC KPGVLTMKEN TVPIVSATCL DEREIMVQVS LVSTMAGALP  180
MSKCIKVLEN EGLRLISSST SAFQNRTFYS LHLQRTQRTM SKECPAFCEE LENALTQKAG  240
LRLHHQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2517460.0AK251746.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf134m16, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565095.11e-115PREDICTED: transcription factor bHLH100-like
SwissprotQ9M1K17e-31ORG2_ARATH; Transcription factor ORG2
TrEMBLM0VQ620.0M0VQ62_HORVD; Uncharacterized protein
STRINGMLOC_36351.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32803472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-32bHLH family protein